Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq7475 297 6e-76
>seq7475
Length=18404
Score = 297 bits (328), Expect = 6e-76
Identities = 542/793 (68%), Gaps = 8/793 (1%)
Strand=Plus/Minus
Query 45433 AACTATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGA 45492
||| |||||||| ||| |||| || ||||| | | | || | ||| ||||| |
Sbjct 17490 AACCATGAAACAGTATTTAGAACTGATGCAAAAAGTGCTGGATGAAGGCACACAGAAAAA 17431
Query 45493 AGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCA 45552
|| || || ||||| || || | || | || || | |||| |||| ||||| ||||
Sbjct 17430 CGACCGTACCGGAACCGGAACGCTTTCCATTTTTGGTCATCAGATGCGTTTTAATCTGCA 17371
Query 45553 GGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACT 45612
||| || |||||||| || ||||| ||| | ||| | |||||||||||| |||| ||
Sbjct 17370 GGAAGGGTTCCCGCTGGTTACGACTAAACGCTGCCATTTACGCTCGATCATTCATGAGCT 17311
Query 45613 GCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGAT 45672
||| |||||||| | ||||| || || ||| ||| |||| || || || | ||
Sbjct 17310 GCTGTGGTTTTTGCAGGGCGACACCAACGTTGCCTACCTGCATGAAAACAACGTCTCAAT 17251
Query 45673 TTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732
|||||||| ||||| ||||||||||| || | ||||| | || ||| ||||||||
Sbjct 17250 CTGGGACGAATGGGCGGATGAAAACGGTAATTTAGGCCCGGTTTATGGCAAACAATGGCG 17191
Query 45733 GTCGTGGAAAGGGGCTGACGGGAAAACGG----TCGACCAAATTGCGGCGGTCTTTAAGG 45788
||||| | | || || ||| | ||||| || | |||| || ||
Sbjct 17190 CGCGTGGCCTACGCCAGATGG----ACGCCATATTGACCAGATCACCACGGTGTTAAACC 17135
Query 45789 AAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGT 45848
| |||| ||||| |||| || || | | || ||| |||||||| | ||
Sbjct 17134 AGCTCAAAAATGACCCGGACTCTCGCCGTATCATCGTTTCCGCATGGAACGTCGGCGAGC 17075
Query 45849 TGGGGGAAATGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCC 45908
||| ||||| | || | || || ||| ||| ||||||||||| ||| |||||
Sbjct 17074 TGGATAAAATGGCGCTGGCGCCGTGCCATGCGTTCTTCCAGTTTTACGTAGCGGATGGCA 17015
Query 45909 GGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACA 45968
| | || ||| | | |||||||| |||| || || || |||||||||||||
Sbjct 17014 AGCTCTCCTGCCAACTGTATCAGCGTTCGTGCGATGTGTTCCTCGGCTTGCCGTTTAACA 16955
Query 45969 TCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCG 46028
| || ||||| | |||||| || ||| | || || || ||||| || || || || |
Sbjct 16954 TTGCCAGCTACTCCCTGTTGGTGCACATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTG 16895
Query 46029 AACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAAC 46088
| | | | ||||| |||||| || |||||| |||||| |||| ||| || | |
Sbjct 16894 ATTTTGTCTGGACCGGTGGCGACACGCACCTGTACAGCAATCATATGGATCAAACGCATC 16835
Query 46089 TGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGT 46148
||||||| | || || |||||| ||||||||||||| || |||||||| ||||| |
Sbjct 16834 TGCAGCTTAGCCGTGAACCGCGCGCGCTGCCGAAGCTGGTTATCAAACGTAAGCCTGAAT 16775
Query 46149 CTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCGGCGA 46208
|||| ||||||||| | ||| || || ||| ||| ||||| || ||||| || | |
Sbjct 16774 CTATTTTTGACTATCGCTTCGAAGACTTCGAAATTGAAGGCTACGATCCGCATCCTGGTA 16715
Query 46209 TTAAGGCTCCTGT 46221
|||| || || ||
Sbjct 16714 TTAAAGCGCCAGT 16702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157729087625178
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |