Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_019708.1 Length=37595 Score E Sequences producing significant alignments: (Bits) Value seq9716 141 2e-29 >seq9716 Length=6568 Score = 141 bits (156), Expect = 2e-29 Identities = 232/328 (71%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 3699 GGCGTAACAGCCAAACGTATCGCCGGTGCGCTTCGGGCGATGAATGGCGCC---GACGTC 3755 ||||| || ||||| || |||| || ||||| || || ||||| || || Sbjct 6000 GGCGTCACCGCCAAGCGCATCGGCGCCGCGCTGCGCAACATC---GGCGCGCGTGATGTG 5944 Query 3756 ACGGTCAATATTAACTCCCCTGGCGGGGACATGTTCGAAGGCCTGGCCATCTACAACCTT 3815 ||||| || | |||||||| ||||| ||| | ||||| ||| |||||||||||||||| Sbjct 5943 ACGGTGAACCTCAACTCCCCGGGCGGCGACTTCTTCGAGGGCATGGCCATCTACAACCTG 5884 Query 3816 CTGCGTGAATACGAAGGCCGTG-TGACTGTGAAGGTGCTCGGTATTGCCGCCAGCGCCGC 3874 ||||| || || |||||| | |||| | ||||| || | |||||| | || Sbjct 5883 CTGCGCGAGCAC-AAGGCCAAGGTGACCATCCGCGTGCTGGGCGTGGCCGCCTCGGTGGC 5825 Query 3875 CTCGGTCATTGCGATGGCCGGGGATGAAATTCAGATCGGCCGTGGTGCCTTCCTGATGAT 3934 ||||| ||||| |||||||| || || || | ||| || ||| | ||||||||||| Sbjct 5824 TTCGGTGATTGCCATGGCCGGCGACGAGATCCTGATGGGTGATGGCTCGTTCCTGATGAT 5765 Query 3935 CCACAACTGCTGGGTCTACGCGATGGGTAACCGCCATGACTTTGCGGA-ACTGGCACAGT 3993 ||||||| ||||| | || | || |||||||| ||| | | || || | | | || Sbjct 5764 CCACAACGCCTGGGCCGTGGCCGTCGGAAACCGCCACGACATGACCGACACAGCCGCCGT 5705 Query 3994 CTCTTGAGCCGTTCGATACCGCTATGGC 4021 || | |||||||||| |||| ||||| Sbjct 5704 -GCTGGCGCCGTTCGATGCCGCGATGGC 5678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120166163132418