Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq4798 96.9 1e-15 >seq4798 Length=3577 Score = 96.9 bits (106), Expect = 1e-15 Identities = 249/377 (66%), Gaps = 33/377 (9%) Strand=Plus/Plus Query 32525 AACCACAGGAACAGGAGGTAAGCCGTGGGTAAGCATC---ACTGGAAAGTGGAAAAACAA 32581 |||||||| | | ||||| || ||||||||| || | | |||||||| |||||||| Sbjct 1683 AACCACAGCATTAAGAGGTGAGTCGTGGGTAATCAACCAGAGTGGAAAGTTGAAAAACAG 1742 Query 32582 CCTGAGTGGTACGTGAAAGCTGTCAGAAAAACTATCGCGGCATTGCCTGGGGGTTACGCT 32641 |||| |||| ||| || |||||| ||||||||| | || ||||| || || | Sbjct 1743 CCTGCGTGGCTGGTGGCTGCGATCAGAAGAACTATCGCTGATTTACCTGGTGGCTATGAA 1802 Query 32642 GAAGCTGCTGA----CTGG------------CTG--GATGTAA---CAGAGAACGCTTTA 32680 ||||||||||| || | ||| || |||| | | | || | | Sbjct 1803 GAAGCTGCTGAAATCCTTGGGGTATATAAATCTGATGACGTAACCCCGGCAACCGATCCA 1862 Query 32681 TT---CAACCGCCTTCGTGCAGATGGCGATCAGATTTTCCCGCTGGGATGGGCAATGGTT 32737 || ||||| |||||| | || ||||| || |||||| |||||||||| ||||| Sbjct 1863 TTGCATAACCGACTTCGTACTACCGGTGATCAAATCTTCCCGTTGGGATGGGCGATGGTC 1922 Query 32738 TTACAGCGCGCGGCTGGCACTCACTACATTGCGGATGCTGTCGCAC---AGTCTGCCGGT 32794 |||||| || | ||| | || | || || ||||||| || | | || |||| Sbjct 1923 TTACAGGCTGCTGGTGGTTCAAACCATATCGCAAATGCTGTTGCCCGGAACTCGAACGGT 1982 Query 32795 GGGGTGTTCGTATCGCTTCCTGAAATTGAGGAAGTAGAGAACGCCGATATAAACCAGCGC 32854 | || || | | | || |||| || || || |||||||| || || |||||| Sbjct 1983 ---CTATTTGTGCCATTGGCCGATGTTGATGATGTTGATAACGCCGACATCAATCAGCGC 2039 Query 32855 CTGCTGGAAGTCATCGA 32871 || ||||| |||||| Sbjct 2040 CTTATGGAATCCATCGA 2056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142291173598128