Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq914 100 3e-16 seq5384 86.0 6e-12 >seq914 Length=7636 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || ||||| ||||| || ||||| || || ||| || Sbjct 2520 ATGCAAATCTTTGTCAAGACTCTCACTGGTAAGACTATCACCCTCGAGGTCGAGGCCTCC 2579 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || ||||| ||||||||||| Sbjct 2580 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGAATCCCTCCCGATCAG 2639 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || ||| ||||||| ||||| Sbjct 2640 CAGCGTCTGATCTTCGCCGG 2659 >seq5384 Length=661 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || ||||| || || || || | ||||| || ||| | Sbjct 404 ATGCAAATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTTTGGAAGTCGAGGCCTCG 345 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| ||||| || || || ||||||||||| Sbjct 344 GACACCATCGAAAACGTGAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAG 285 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || ||| ||||||| || || Sbjct 284 CAGCGTCTGATCTTCGCTGG 265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449833618937560