Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1056 172 9e-37 seq1524 141 1e-27 >seq1056 Length=10972 Score = 172 bits (190), Expect = 9e-37 Identities = 179/235 (76%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| |||||||||||| |||| || || ||| | | Sbjct 8480 TGTACTTGGTGACAGCCTTGGTTCCCTCGGAGACGGCGTGCTTGGCAAGCTCTCCGGGGA 8421 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 ||| ||||| ||||||||||||| ||||| | ||| ||| |||||| | Sbjct 8420 GGATAAGGCGGACGGCGGTCTGGACTTCGCGAGAAGAGATGGTGGACTTCTTGTTGTAGT 8361 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| ||| |||||||| | ||||||| |||| | ||||||||| || ||||||| Sbjct 8360 GAGCCAGACGGGAGGCCTCGGCGGCGATGCGCTCGAAGACGTCGTTGACGAAGGAGTTCA 8301 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 |||| ||||| | ||| |||| || ||| ||||| ||||||||||| || Sbjct 8300 TGATGGACATGGCCTTGGAAGAGACACCGGTGTCAGGGTGAACCTGCTTGAGGAC 8246 >seq1524 Length=3248 Score = 141 bits (156), Expect = 1e-27 Identities = 261/376 (69%), Gaps = 9/376 (2%) Strand=Plus/Plus Query 2175015 ATCCAGAGAAAGGTG--TGTGGCTG-CGCGGC-GGTGCGCACGGCATCGAGCGCCGTTGC 2175070 |||| |||| ||| |||||||| ||||| || ||| | ||||||| || | Sbjct 2766 ATCCGGAGAGAGGAACATGTGGCTGGCGCGGGAGGCGCGGATCGCATCGACAGCGATACG 2825 Query 2175071 CACGCTGCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTC 2175130 | | |||| || |||||||||||||| |||||||| | | ||||| ||||||||||| Sbjct 2826 CGTGTTGCCATCCGTGCCGTTTTTAAAGCCGACCGGACAGGAGAGCGCGGACGCCATTTC 2885 Query 2175131 GCGGTGCACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGC 2175190 ||||| | ||||| ||||||||||||||||| | ||| ||||| || | ||||| || Sbjct 2886 ACGGTGGATTTGGCTTTCGGTGGTGCGCGCGCCAATGGCTCCCCAGGCGATCAGGTCGGC 2945 Query 2175191 CAAATAGGGCGCCACCAAAGGGCTGAGAAACTCGACAGCCACGGGCTGGCCGACGTCGAC 2175250 | || ||| | || || || ||| || | ||| |||| | | || Sbjct 2946 AATGTATTGCGGGCTGAGCAGGTCCAGGAATTCGGTGGCGATCGGCAGGCCCAGGCCGCT 3005 Query 2175251 GACCAGGTCGCGCAGCAGTCGACGCGATGTGGCG-AGGCCGGCGGCCAGGCGGCACGACC 2175309 | | ||| |||||||| ||||| | ||| ||||| || | |||| | | Sbjct 3006 G---ATGTCCAGCAGCAGTTCACGCG-CGACGCGCAGGCCTTCGTTGATGCGGAAGCTGC 3061 Query 2175310 CGTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGA 2175369 |||| |||| || ||| || || ||||||||| || ||||| |||||||||||||||| Sbjct 3062 CGTCCAGGTACGGATCGTTGATCAAGCCCTTCCAGCCCACGGTGGTGCGCGGCTTTTCGA 3121 Query 2175370 CATAGGCGCGCATGAC 2175385 || ||||||| || Sbjct 3122 AGTACACGCGCATCAC 3137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915036176619503