Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq6761 113 4e-20 >seq6761 Length=4567 Score = 113 bits (124), Expect = 4e-20 Identities = 234/346 (68%), Gaps = 8/346 (2%) Strand=Plus/Minus Query 26446 CTGACCAAAGAATAAATTATCACCTAGCACAAGTGCTACAGAATC-TTCACCAAT---AA 26501 |||||||||||| | || || |||||||| || ||| || |||| | | || Sbjct 3844 CTGACCAAAGAAGATGTTGTCCCCTAGCACCAG----ACACGATGGTTCATCGTTGAGAA 3789 Query 26502 AGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGCTATCCTGTATTGCATACT 26561 | | ||||| |||||||| || | ||||| || | ||||| ||| ||||| | Sbjct 3788 ACGTTTCACCGATAATAAAAGCCTGCGCTAATCCATCCGGGCTCGGCTGCTCAGCATAGT 3729 Query 26562 GTAGGGAAATACCAAAAGAAGAACCATCACCTAGAAGATTTACAAAATTAATTTGATCTT 26621 | || ||| || || ||| |||||||| || ||| |||| || ||||| Sbjct 3728 GCAGTTCAATGCCGAACTCAGACCCATCACCCAGCAGACGCTGGAAATAGCCTTTATCTT 3669 Query 26622 CTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCATTAGGACAGAGAGTGGAT 26681 | ||||| || || || || ||||| | |||||| | |||||||| || || || || | Sbjct 3668 CCGGTGTAGTGATAATCAGGATTTCGCGAATTCCCGCCAGCATTAGTACTGATAGCGGGT 3609 Query 26682 AATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGTTTACTAACCCCTTTAGTAACTG 26741 | |||||||| || ||||||||||| || ||||| || || || || |||| | Sbjct 3608 AGTAAATCATTGGCTTATCGTAAATGGGCAATAGCTGCTTCGATACGCCACGCGTAATGG 3549 Query 26742 GGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTTTCAT 26787 | || || | || || ||||| || | || ||||||||||| Sbjct 3548 GATACAGGCGAGTACCTGAGCCACCCGCCAGAATGATACCTTTCAT 3503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475362787854240