Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq5384 89.7 1e-12 seq8974 87.8 4e-12 >seq5384 Length=661 Score = 89.7 bits (98), Expect = 1e-12 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 206297 TTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGA 206356 || |||| | |||||||||||||| |||||| | || ||| ||||||||||| |||||| Sbjct 505 TTCTCTTTTCAGGAAAGCAGTTGGAGGATGGACGCACGTTGTCCGATTACAACATCCAGA 446 Query 206357 AAGAGTCTACTCTTCACCTTGT 206378 | || |||||||||||||| || Sbjct 445 AGGAATCTACTCTTCACCTCGT 424 >seq8974 Length=654 Score = 87.8 bits (96), Expect = 4e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 206296 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 206355 ||| | || || ||||||||| | ||||||||| | || ||| ||||||||||| ||||| Sbjct 190 CTTTTATTTGCAGGAAAGCAGCTCGAAGATGGACGCACGTTGTCCGATTACAACATCCAG 131 Query 206356 AAAGAGTCTACTCTTCACCTTGT 206378 || |||||||| |||||||| || Sbjct 130 AAGGAGTCTACGCTTCACCTGGT 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181648528567217