Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq915 89.7 4e-13 seq8974 86.0 5e-12 seq5384 84.2 2e-11 seq914 84.2 2e-11 >seq915 Length=7668 Score = 89.7 bits (98), Expect = 4e-13 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||||||| | ||||||||||| ||||| || || | |||||| || || ||||||| Sbjct 3918 TACCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTGG 3859 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 |||| | || | ||||| | ||| ||||| || || || |||| || || || | Sbjct 3858 CCTTCACATTCTCGATGGTGTCGGAGGCCTCAACCTCAAGGGTGATAGTCTTTCCGGTGA 3799 Query 27226 GAGTTTTCACAAAGATTTGCAT 27247 |||| || || ||||||||||| Sbjct 3798 GAGTCTTGACGAAGATTTGCAT 3777 >seq8974 Length=654 Score = 86.0 bits (94), Expect = 5e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 27106 TACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGT 27165 |||||||| ||||||||||||| ||||| || || | ||||| || || ||||||| Sbjct 248 TACCGGCGAAAATGAGACGCTGCTGATCGGGGGGAATGCCCTCCTTGTCCTGGATCTTGG 307 Query 27166 TTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCA 27225 |||| | || | ||||| | ||| || ||||| | ||| || | || || || | Sbjct 308 CCTTCACATTCTCGATGGTGTCCGAGGCCTCGACTTCCAAAGTGATGGTCTTTCCAGTGA 367 Query 27226 GAGTTTTCACAAAGATTTGCAT 27247 |||| || |||||||| ||||| Sbjct 368 GAGTCTTGACAAAGATCTGCAT 389 >seq5384 Length=661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||| ||| | || |||||||| ||||| || || | ||||| || || |||||| Sbjct 264 ACCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTAGC 323 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 |||| | |||| | ||||| | ||| || ||||| | ||| || | ||||| || || Sbjct 324 CTTCACGTTTTCGATGGTGTCCGAGGCCTCGACTTCCAAAGTGATGGTCTTGCCGGTGAG 383 Query 27227 AGTTTTCACAAAGATTTGCAT 27247 ||| || |||||||||||||| Sbjct 384 AGTCTTGACAAAGATTTGCAT 404 >seq914 Length=7636 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 27107 ACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTT 27166 ||||||| | || |||||||| ||||| || || | ||||| ||||| ||||||| Sbjct 2660 ACCGGCGAAGATCAGACGCTGCTGATCGGGAGGGATTCCCTCCTTATCCTGGATCTTGGC 2601 Query 27167 TTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAG 27226 |||| | || | ||||| | ||| || || || || || |||| || || || || Sbjct 2600 CTTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATAGTCTTACCAGTGAG 2541 Query 27227 AGTTTTCACAAAGATTTGCAT 27247 ||| || |||||||||||||| Sbjct 2540 AGTCTTGACAAAGATTTGCAT 2520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424875479791224