Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_028449.1 Length=63569 Score E Sequences producing significant alignments: (Bits) Value seq4798 181 4e-41 >seq4798 Length=3577 Score = 181 bits (200), Expect = 4e-41 Identities = 290/419 (69%), Gaps = 12/419 (3%) Strand=Plus/Plus Query 22718 ATGCGGGTGATGTTTGTCTGTCCGTACACCATCCTGCTGAACCAGACAGCGGAACGTTTC 22777 ||||| || |||||||| |||||| || | ||||| |||||||||| || ||| Sbjct 3143 ATGCGCGTAATGTTTGTGGCTCCGTATACGGTACTGCTTGACCAGACAGCCACCCGATTC 3202 Query 22778 ACCGAATACGGTTTGCCGTGGGAAGAAATCAGTTTTGTATGGCGTGATCACCCTAACTAT 22837 | ||||| ||| | || | ||||| ||||||| ||| |||||||||||||| ||| Sbjct 3203 ATGGAATATGGTCTTCCTGGCGAAGAGATCAGTTATGTCTGGCGTGATCACCCGTCATAT 3262 Query 22838 GACCCGTCACGACTGATTCAGATTGCCAGTGCCGACACGCTGATCCGTCGTGAGTTTCCT 22897 ||||| || || |||||||||||||| ||||| ||||| || || ||||| || || Sbjct 3263 AACCCGACAGCGCTTATTCAGATTGCCAGCGCCGATACGCTCATTCGCCGTGAATTCCCG 3322 Query 22898 GACAACATCGATCTGCTGATCATCGATGAAGCACACATGAAGCGTCGTGCGTTACTTGAG 22957 ||||||||||| ||||||||| | || ||||| ||| |||| || | | || ||| Sbjct 3323 GACAACATCGACCTGCTGATCGTTGACGAAGCCCACCTGAAACGCAAAAAGCTGCTGGAG 3382 Query 22958 GTTAT------------CCGGGACAGAGACATCAGGGTTCTTGGACTTTCCGGCACCCCG 23005 ||||| ||| ||| | | | | ||| | || |||||||| || || Sbjct 3383 GTTATCGACAACCTGACCCGCAACACAAAAACGAAGGTGGTCGGTCTTTCCGGTACGCCT 3442 Query 23006 TTCGCAGCCTGGATGGGGAAGTACTACGAATGCCTGCTCAAGCCTACAACGATTCGTGAA 23065 ||||| | | || || ||||| | ||||| | ||||| |||||||| ||| Sbjct 3443 TTCGCCAAGTTCCTAGGCAATTACTATCAGCGCCTGATTAAGCCAACAACGATGAAGGAA 3502 Query 23066 CTTATTCAGCGTGGTGATCTGAGCGATTACGAGTTTTTTGCCCCCTCAATGCCTGATCT 23124 || || | ||| | |||||| | ||||| |||| || || ||| || ||||| Sbjct 3503 CTGATCGCGATTGGCGCACTGAGCAAATACGAATTTTACGCGCCGTCACATCCCGATCT 3561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203267811548410