Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq4798 181 4e-41 >seq4798 Length=3577 Score = 181 bits (200), Expect = 4e-41 Identities = 290/419 (69%), Gaps = 12/419 (3%) Strand=Plus/Minus Query 14299 AGATCAGGCATTGAGGGGGCAAAAAACTCATAATCGCTCAGATCACCACGCTGAATAAGT 14358 ||||| || ||| || || |||| || || | |||||| | ||| | || ||| Sbjct 3561 AGATCGGGATGTGACGGCGCGTAAAATTCGTATTTGCTCAGTGCGCCAATCGCGATCAGT 3502 Query 14359 TCACGAATCGTTGTAGGCTTGATCAGGCATTCGTAGTACTTCCCCATCCAGGCTGCGAAC 14418 || |||||||| ||||| ||||||| | ||||| || || | | ||||| Sbjct 3501 TCCTTCATCGTTGTTGGCTTAATCAGGCGCTGATAGTAATTGCCTAGGAACTTGGCGAAA 3442 Query 14419 GGGGTGCCGGAAAGCCCAAGAACCCTGATATCTTTGTCCCGG------------ATAACC 14466 || || |||||||| || | ||| | | | | ||| ||| |||||| Sbjct 3441 GGCGTACCGGAAAGACCGACCACCTTCGTTTTTGTGTTGCGGGTCAGGTTGTCGATAACC 3382 Query 14467 TCAAGTAACGCACGACGCTTCATGTGTGCTTCATCGATGATCAGCAGATCGATGTTGTCA 14526 || || | | || |||| ||| ||||| || | ||||||||| ||||||||||| Sbjct 3381 TCCAGCAGCTTTTTGCGTTTCAGGTGGGCTTCGTCAACGATCAGCAGGTCGATGTTGTCC 3322 Query 14527 GGAAACTCACGACGGATCAGCGTGTCGGCACTGGCAATCTGAATCAGTCGTGACGGGTCA 14586 || || ||||| || || ||||| ||||| |||||||||||||| || || ||||| | Sbjct 3321 GGGAATTCACGGCGAATGAGCGTATCGGCGCTGGCAATCTGAATAAGCGCTGTCGGGTTA 3262 Query 14587 TAGTTAGGGTGATCACGCCATACAAAACTGATTTCTTCCCACGGCAAACCGTATTCGGTG 14646 || |||||||||||||| ||| ||||||| ||||| | || | ||| ||||| || Sbjct 3261 TATGACGGGTGATCACGCCAGACATAACTGATCTCTTCGCCAGGAAGACCATATTCCATG 3202 Query 14647 AAACGTTCCGCTGTCTGGTTCAGCAGGATGGTGTACGGACAGACAAACATCACCCGCAT 14705 || || |||||||||| ||||| | || |||||| |||||||| || ||||| Sbjct 3201 AATCGGGTGGCTGTCTGGTCAAGCAGTACCGTATACGGAGCCACAAACATTACGCGCAT 3143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195164029410978