Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq7475 100 3e-16 >seq7475 Length=18404 Score = 100 bits (110), Expect = 3e-16 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 78436 TCACCACCTGTCCATACCAGATCACCAACTTCGTACCCGCAAATATCAGCGATAATATGC 78495 || ||||| ||||| || | |||||| ||||| |||| | || || || ||| Sbjct 16873 TCGCCACCGGTCCAGACAAAATCACCCACTTCCAGATCGCACTGCTGCGCCATCATGTGC 16932 Query 78496 GTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACGC 78555 || || | |||| ||| || || |||||||| || | ||| ||||| ||||||| Sbjct 16933 ACCAACAGGGAGTAGCTGGCAATGTTAAACGGCAAGCCGAGGAACACATCGCACGAACGC 16992 Query 78556 TGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACAC 78615 |||||| || || || || || | |||| ||||||||||| || ||| Sbjct 16993 TGATACAGTTGGCAGGAGAGCTTGCCATCCGCTACGTAAAACTGGAAGAACGCATGGCAC 17052 Query 78616 GGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATGATCCCGCGA 78675 || || |||||||||||||| || | ||||||||||||||||||||| | |||| Sbjct 17053 GGCGCCAGCGCCATTTTATCCAGCTCGCCGACGTTCCATGCGGAAACGATGATACGGCGA 17112 Query 78676 TCGTCTGG 78683 ||| || Sbjct 17113 GAGTCCGG 17120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568392755948160