Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq8635 114 1e-20 >seq8635 Length=3873 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 6922 CTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTC 6981 |||||| |||||||| || ||||| ||||| | | ||| | ||| || | ||||| Sbjct 3064 CTGGAATCCGTAGACGGGTCCCAAATCGCCGACTTTGCGATCCGTGAAGCCTTGTTTGTC 3123 Query 6982 CAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTT 7041 || || || | || || | || ||||||||||| || ||| | ||| || Sbjct 3124 GAGGAACTCCCTCGATCCATTCGCATCCCAGATCTTGACTCCCTTGTCGTGGAGACGCTG 3183 Query 7042 GGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACAC 7101 | ||| |||| | ||| ||| ||||||| ||||||||| || || || |||||||| || Sbjct 3184 GCTGTCCGTGTCGCCCTTCATAAACCACAACAGCTCCTCCACAACTCCTTTCCAGTAGAC 3243 Query 7102 ACGTTTCGTCGTCAGCAGCGGAA 7124 || ||||||||||||||||||| Sbjct 3244 TCGCTTCGTCGTCAGCAGCGGAA 3266 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 34221 TTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGT 34280 ||||||||||||||||||| || || |||||||| || || || ||||||||| |||||| Sbjct 3266 TTCCGCTGCTGACGACGAAGCGAGTCTACTGGAAAGGAGTTGTGGAGGAGCTGTTGTGGT 3207 Query 34281 TCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACG 34340 | ||| ||| | |||| ||| | || ||| | ||| || ||||||||||| | Sbjct 3206 TTATGAAGGGCGACACGGACAGCCAGCGTCTCCACGACAAGGGAGTCAAGATCTGGGATG 3147 Query 34341 CTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACT 34400 | | || || | || || || ||||| | || ||| | ||| | | ||||| | Sbjct 3146 CGAATGGATCGAGGGAGTTCCTCGACAAACAAGGCTTCACGGATCGCAAAGTCGGCGATT 3087 Query 34401 TGGGCCCGGTCTACGGGTTCCAG 34423 |||| || |||||||| |||||| Sbjct 3086 TGGGACCCGTCTACGGATTCCAG 3064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448198651483440