Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7475 87.8 1e-12 >seq7475 Length=18404 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || |||||||||| | | || ||||||||||| |||||||| |||| ||||| | Sbjct 16918 TGCGCCATCATGTGCACCAACAGGGAGTAGCTGGCAATGTTAAACGGCAAGCCGAGGAAC 16977 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGT-CGCTCACGTAAAACTG 29844 | || | || | ||| || || ||||| ||||||| || | |||| ||||||||||| Sbjct 16978 ACATCGCACGAACGCTGATACAGTTGGCAGGAGAGCTTGCCATCCGCT-ACGTAAAACTG 17036 Query 29845 ACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACA 29904 | | ||||||||||| | || ||||| | ||| || | |||||| || | Sbjct 17037 GAAGAACGCATGGCACGGCGCCAGCGCCATTTTATCCAGCTCGCCGACGTTCCATGCGGA 17096 Query 29905 CACGATGATGCG 29916 |||||||| || Sbjct 17097 AACGATGATACG 17108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406106882553022