Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq9716 208 2e-49 >seq9716 Length=6568 Score = 208 bits (230), Expect = 2e-49 Identities = 243/326 (75%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 25698 AGCATCAGCATCTTCGACCCGATCGGGTACGACTGGTGGACTGGCGAGGGCGTCACGGCC 25757 |||||| ||||| |||| | |||||| | ||||| | ||| ||||||||| ||| Sbjct 6045 AGCATCTCCATCTACGACTCCATCGGGGAGAACTGGGAG---GGCACGGGCGTCACCGCC 5989 Query 25758 AAGCGCATCAGCGCCGCGTTGCGAGCCATGAAGGATGCCGACGTGGTGGTGAACATCAAC 25817 ||||||||| |||||||| |||| ||| | || ||| ||||||| ||||| Sbjct 5988 AAGCGCATCGGCGCCGCGCTGCGCAACATCGGCGCGCGTGATGTGACGGTGAACCTCAAC 5929 Query 25818 AGCCCTGGCGGAGATGTCTTCGAGGGGCTGGCGATCTACAACCTGCTGCGCGAGCACAAG 25877 ||| ||||| || |||||||||| |||| ||||||||||||||||||||||||||| Sbjct 5928 TCCCCGGGCGGCGACTTCTTCGAGGGCATGGCCATCTACAACCTGCTGCGCGAGCACAAG 5869 Query 25878 GGCAAGGTCACCGTACGCGTGCTCGGCCTGGCAGCTTCCGCAGCGTCGTTCATTGCCATG 25937 | |||||| ||| | |||||||| ||| |||| || || | || ||| | ||||||||| Sbjct 5868 GCCAAGGTGACCATCCGCGTGCTGGGCGTGGCCGCCTCGGTGGCTTCGGTGATTGCCATG 5809 Query 25938 GCGGCCGATGAGGTGAAGATCGCCCGCGCCGGC---TTCCTGATGATCCACAACGCCTGG 25994 || | ||| ||| | ||| | | | ||| |||||||||||||||||||||||| Sbjct 5808 GCCGGCGACGAGATCCTGATGG---GTGATGGCTCGTTCCTGATGATCCACAACGCCTGG 5752 Query 25995 ACGATCGCCGCGGGTGACCGCAACGA 26020 | | |||| || ||||| |||| Sbjct 5751 GCCGTGGCCGTCGGAAACCGCCACGA 5726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133847514506442