Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq7475 125 4e-24 >seq7475 Length=18404 Score = 125 bits (138), Expect = 4e-24 Identities = 373/566 (66%), Gaps = 12/566 (2%) Strand=Plus/Minus Query 896 GAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATCGGTTGCGTACGAACTT 955 || || ||||||||||| || || || ||| ||| || ||| | | || || Sbjct 17369 GAAGGGTTCCCGCTGGTTACGACTAAACGCTGCCATTTACGCTCGATCATTCATGAGCTG 17310 Query 956 CTGTGGTTCCT-CAGTGGCGACACGAACGTGAAGGCGCTCAACGACAACGGCGTCACCAT 1014 |||||||| | ||| |||||||| ||||| || | || ||| |||| | || Sbjct 17309 CTGTGGTTTTTGCAG-GGCGACACCAACGTTGCCTACCTGCATGAAAACAACGTCTCAAT 17251 Query 1015 CTGGGACGAGTGGGCCGACGCCGGCGGAAACCTCGGTCCTGTCTACGGCGCGCAGTGGCG 1074 ||||||||| ||||| || | ||| || | || || || || ||| || ||||| Sbjct 17250 CTGGGACGAATGGGCGGATGAAAACGGTAATTTAGGCCCGGTTTATGGCAAACAATGGCG 17191 Query 1075 GCACTGGCATGTCGAGGACGGAGGATCGTCGTGGATTGACCAGATCTCGGCCGCCGTGGA 1134 |||| | | | | || | || | | |||||||||||| | | | | | Sbjct 17190 CGCGTGGCCT----ACGCCAGATGGACGCCAT--ATTGACCAGATCACCACGGTGTTAAA 17137 Query 1135 GCTGCTTCGCGAGGACCCTGACTCGCGCCGGAACGTGGTATCCGCATGGAACGTCGGTGA 1194 | ||| | ||||| ||||| ||||| | | | || ||||||||||||||||| || Sbjct 17136 CCAGCTCAAAAATGACCCGGACTCTCGCCGTATCATCGTTTCCGCATGGAACGTCGGCGA 17077 Query 1195 CCTCAGCGACATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGG 1254 || | ||||| || |||||||| | |||||| | ||||| | || || Sbjct 17076 GCTGGATAAAATGGCGCTGGCGCCGTGCCATGCGTTCTTCCAGTTTTACGTAGCGGATGG 17017 Query 1255 CCGGCTCTCGCTG-CAGGTCTACCAGCG-CAGCGCGGACATGTTCCTCGGTGTGCCGTTC 1312 | |||||| ||| || | || ||||| | || || |||||||||| ||||||| Sbjct 17016 CAAGCTCTC-CTGCCAACTGTATCAGCGTTCGTGC-GATGTGTTCCTCGGCTTGCCGTTT 16959 Query 1313 AATATCGCCTCGTACGCGCTCCTCGCGCACATGTTCGCGCAGCAGGCCGGCCTGCGGGTG 1372 || || ||| ||| | || | | ||||||| | ||||||||| || ||| ||| Sbjct 16958 AACATTGCCAGCTACTCCCTGTTGGTGCACATGATGGCGCAGCAGTGCGATCTGGAAGTG 16899 Query 1373 GGTGAGCTGATCTGGACCGGCGGCGACTGCCACATCTACAACAACCACGTCGACCAGGCG 1432 ||||| | |||||||||| |||||| ||| | |||| ||| || | || || || Sbjct 16898 GGTGATTTTGTCTGGACCGGTGGCGACACGCACCTGTACAGCAATCATATGGATCAAACG 16839 Query 1433 CTGATGCAGCTCCGCCGACGACCGCG 1458 | ||||||| |||| |||||| Sbjct 16838 CATCTGCAGCTTAGCCGTGAACCGCG 16813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296090139280677