Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq7475 185 1e-41
>seq7475
Length=18404
Score = 185 bits (204), Expect = 1e-41
Identities = 225/304 (74%), Gaps = 2/304 (1%)
Strand=Plus/Minus
Query 196014 ATGAAACAGTATTTGGAATTGATGCACACCGTGTTGAACGAAGGT-CACGAGAAAGCTGA 196072
|||||||||||||| ||| ||||||| | ||| || | ||||| ||| ||||| ||
Sbjct 17486 ATGAAACAGTATTTAGAACTGATGCAAAAAGTGCTGGATGAAGGCACAC-AGAAAAACGA 17428
Query 196073 CCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGACCTGCGCAA 196132
||||||||| || || || | || ||||| || |||||||||||||| | |||| |
Sbjct 17427 CCGTACCGGAACCGGAACGCTTTCCATTTTTGGTCATCAGATGCGTTTTAATCTGCAGGA 17368
Query 196133 AGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCACGAACTGTT 196192
||||||||||||||| || || ||| | || | || || ||||| || || ||| |
Sbjct 17367 AGGGTTCCCGCTGGTTACGACTAAACGCTGCCATTTACGCTCGATCATTCATGAGCTGCT 17308
Query 196193 GTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTG 196252
|||||| || | |||||||||||| | || ||| | || ||||||||| |||||
Sbjct 17307 GTGGTTTTTGCAGGGCGACACCAACGTTGCCTACCTGCATGAAAACAACGTCTCAATCTG 17248
Query 196253 GGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAGTGGCGTGC 196312
||| || ||||| |||||| | || || | ||||| || || || || || ||||| ||
Sbjct 17247 GGACGAATGGGCGGATGAAAACGGTAATTTAGGCCCGGTTTATGGCAAACAATGGCGCGC 17188
Query 196313 ATGG 196316
|||
Sbjct 17187 GTGG 17184
Score = 172 bits (190), Expect = 8e-38
Identities = 233/322 (72%), Gaps = 2/322 (1%)
Strand=Plus/Minus
Query 196749 CTGTCCTGTCAGCTTTACCAGCGCA-GTGCAGACGTCTTCCTCGGTGTCCCGTTCAACAT 196807
|| ||||| || || || ||||| |||| || || |||||||| | ||||| |||||
Sbjct 17012 CTCTCCTGCCAACTGTATCAGCGTTCGTGC-GATGTGTTCCTCGGCTTGCCGTTTAACAT 16954
Query 196808 CGCTTCGTACGCTCTGTTGGTTCACATGGTGGCACAGCAGGTCAATATGGTGGCGGGTGA 196867
|| ||| | |||||||| |||||| |||| |||||| | || ||| | ||||||
Sbjct 16953 TGCCAGCTACTCCCTGTTGGTGCACATGATGGCGCAGCAGTGCGATCTGGAAGTGGGTGA 16894
Query 196868 TTTCGTCTGGACGGGCGGCGATACCCATCTGTACTCTAACCATCTGGAACAGGCCACGTT 196927
||| |||||||| || ||||| || || |||||| || ||| |||| || | |
Sbjct 16893 TTTTGTCTGGACCGGTGGCGACACGCACCTGTACAGCAATCATATGGATCAAACGCATCT 16834
Query 196928 GCAGCTCTCCCGTGTACCGCATGATCTGCCTAAGCTCGTTATCAAACGTAAACCGGATTC 196987
|||||| ||||| ||||| | ||||| ||||| |||||||||||||| || || ||
Sbjct 16833 GCAGCTTAGCCGTGAACCGCGCGCGCTGCCGAAGCTGGTTATCAAACGTAAGCCTGAATC 16774
Query 196988 CATTTTCGACTATAAGTTCGAAGATTTTGAAATCGTGGGTTACGAAAGCCACCCACCCAT 197047
||||| |||||| |||||||| || ||||| | || ||||| || || ||
Sbjct 16773 TATTTTTGACTATCGCTTCGAAGACTTCGAAATTGAAGGCTACGATCCGCATCCTGGTAT 16714
Query 197048 TAAGGCACCGGTTGCCATCTAA 197069
||| || || || || ||||||
Sbjct 16713 TAAAGCGCCAGTGGCTATCTAA 16692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770197652687320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |