Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26]
11,377 sequences; 38,321,349 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq7475 178 5e-40
>seq7475
Length=18404
Score = 178 bits (196), Expect = 5e-40
Identities = 330/478 (69%), Gaps = 10/478 (2%)
Strand=Plus/Minus
Query 51861 GAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGCGTC 51920
||| |||||||||| | |||| || ||||| | | || ||| | || ||||
Sbjct 17315 GAGCTGCTGTGGTTTTTGCAGGGCGACACCAACGTTGCCTACCTGCATGAAAACAACGTC 17256
Query 51921 AGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAGCAG 51980
|| ||||||||||||||||||||||| ||||| | || || || ||||| || ||
Sbjct 17255 TCAATCTGGGACGAATGGGCGGATGAAAACGGTAATTTAGGCCCGGTTTATGGCAAACAA 17196
Query 51981 TGGCGTAGTTGGGATGCT---GGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037
||||| ||| | | | ||| || | || || |||||| | | | ||
Sbjct 17195 TGGCGCGCGTGGCCTACGCCAGATGGACGCCAT---ATTGACCAGATC-ACCACGGTGTT 17140
Query 52038 AAATCAATT-AAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGG 52096
||| || | || || || || || ||| || ||| || || || ||||| || ||
Sbjct 17139 AAACCAGCTCAAAAATGACCCGGACTCTCGCCGTATCATCGTTTCCGCATGGAACGTCGG 17080
Query 52097 TGATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGA 52156
|| ||||| | |||||| |||| || |||||| | | ||||| || || ||||| ||
Sbjct 17079 CGAGCTGGATAAAATGGCGCTGGCGCCGTGCCATGCGTTCTTCCAGTTTTACGTAGCGGA 17020
Query 52157 AGGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTT 52216
|| ||||| || ||||| |||||||||| || ||| ||||| | ||| | |||||
Sbjct 17019 TGGCAAGCTCTCCTGCCAACTGTATCAGCGTTCGTGCGATGTGTTCCTCGGCTTGCCGTT 16960
Query 52217 TAACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT-TGGCCTTGATG 52275
||||||||||||||| ||| || || ||| |||| || | |||||| | || || |
Sbjct 16959 TAACATTGCCAGCTACTCCCTGTTGGTGCACATGATGGCGC-AGCAGTGCGATCTGGAAG 16901
Query 52276 TTGGTGAATTCATTTGGACTGGTGGCGACGTCCATATCTACAACAACCATGTAGATCA 52333
| ||||| || | ||||| ||||||||| || | |||| ||| ||| | |||||
Sbjct 16900 TGGGTGATTTTGTCTGGACCGGTGGCGACACGCACCTGTACAGCAATCATATGGATCA 16843
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190070317673970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |