Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_031251.1 Length=47880 Score E Sequences producing significant alignments: (Bits) Value seq9716 80.6 8e-11 >seq9716 Length=6568 Score = 80.6 bits (88), Expect = 8e-11 Identities = 148/217 (68%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 3469 TCAACAGCCCGGGCGGCAACGTGTTCGACGGGATCGCGATCCTCAACGCGCTACGCGGTC 3528 ||||| |||||||||| || | ||||| || || || ||| |||| ||| |||| | Sbjct 5933 TCAACTCCCCGGGCGGCGACTTCTTCGAGGGCATGGCCATCTACAACCTGCTGCGCGAGC 5874 Query 3529 ACAAGGCCCACGTCACCACCATCGTCGACGGCCTCGCAGCGTCAGCAGCGAGCTTCATCG 3588 |||||||| | || |||| | ||| ||| | || || || | || | || | Sbjct 5873 ACAAGGCCAAGGTGACCATCCGCGTGCTGGGCGTGGCCGCCTCGGTGGCTTCGGTGATTG 5814 Query 3589 CGATGGCCGGCGACGAGATCGTGATGAATCGCAACGCGGAGATGATGATTCACGACGCCT 3648 | |||||||||||||||||| ||||| | | || ||||||| ||| |||||| Sbjct 5813 CCATGGCCGGCGACGAGATCCTGATGGGTGATGGCTCGTTCCTGATGATCCACAACGCCT 5754 Query 3649 CCGGTGTGTGCATCGGCAACGCCAAGGACATGGCCGA 3685 | ||| | |||| ||| | | |||||| |||| Sbjct 5753 GGGCCGTGGCCGTCGGAAACCGCCACGACATGACCGA 5717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153073716659508