Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20MCB_20[genbank_20GCA_5F000934875.1_202015-02-26] 11,377 sequences; 38,321,349 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq915 100 2e-16 seq914 98.7 7e-16 seq913 98.7 7e-16 seq5384 91.5 1e-13 seq912 86.0 5e-12 >seq915 Length=7668 Score = 100 bits (110), Expect = 2e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| ||||| | |||||||||||| | || | ||| ||||| ||| ||||| | Sbjct 3916 CCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATACCCTCCTTGTCCTGGATCTTGGCC 3857 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| | | |||||||||| || || ||||| | || || |||||||| ||||| Sbjct 3856 TTCACATTCTCGATGGTGTCGGAGGCCTCAACCTCAAGGGTGATAGTCTTTCCGGTGAGA 3797 Query 44318 GTCTTCACGAAGATTTGCAT 44337 ||||| |||||||||||||| Sbjct 3796 GTCTTGACGAAGATTTGCAT 3777 >seq914 Length=7636 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/156 (74%), Gaps = 1/156 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| ||||||| |||||||||||| | ||| | || ||||| ||| ||||| | Sbjct 2659 CCGGCGAAGATCAGACGCTGCTGATCGGGAGGGATTCCCTCCTTATCCTGGATCTTGGCC 2600 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| | | |||||||||| || || ||||| | || || ||||| || ||||| Sbjct 2599 TTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATAGTCTTACCAGTGAGA 2540 Query 44318 GTCTTCACGAAGATTTGCATGA-TGTGAATGAAAAT 44352 ||||| || ||||||||||| | || |||| |||| Sbjct 2539 GTCTTGACAAAGATTTGCATTACTGAAAATGGAAAT 2504 >seq913 Length=4471 Score = 98.7 bits (108), Expect = 7e-16 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||||||||||| |||||||||||| | || | |||||||| ||| ||||| | Sbjct 230 CCGGCAAAGATCAGACGCTGCTGATCAGGGGGAATGCCTTCCTTATCCTGGATCTTAGCC 171 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 ||| | |||| | ||||| || | | || ||||||| || || |||||||| ||||| Sbjct 170 TTC-ACGTTCTCGATGGTATCCGAAGCCTCGACCTCCAGAGTGATAGTCTTTCCGGTGAG 112 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| ||||| Sbjct 111 TGTCTTGACGAAGATCTGCAT 91 >seq5384 Length=661 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 || || ||||||| |||||||||||| | ||| | || ||||| ||| ||||| | Sbjct 265 CCAGCGAAGATCAGACGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTAGCC 324 Query 44258 TTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGG 44317 |||| || | |||||||| | || || || |||| || || ||||| || ||||| Sbjct 325 TTCACGTTTTCGATGGTGTCCGAGGCCTCGACTTCCAAAGTGATGGTCTTGCCGGTGAGA 384 Query 44318 GTCTTCACGAAGATTTGCAT 44337 ||||| || ||||||||||| Sbjct 385 GTCTTGACAAAGATTTGCAT 404 >seq912 Length=596 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 44198 CCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC 44257 ||||| || || | |||||||||||| | || | || ||||| ||| ||||| | Sbjct 366 CCGGCGAAAATGAGACGCTGCTGATCAGGGGGAATTCCCTCCTTATCCTGGATCTTAGCC 307 Query 44258 TTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAG 44316 |||| |||| | || ||||| | || || ||||| | || ||||||||||| ||||| Sbjct 306 TTCAC-GTTCTCGATCGTGTCAGAGGCCTCGACCTCGAGGGTGATCGTCTTTCCGGTGAG 248 Query 44317 GGTCTTCACGAAGATTTGCAT 44337 ||||| |||||||| ||||| Sbjct 247 TGTCTTGACGAAGATCTGCAT 227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359940484743609