Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq72756 84.2 2e-11 seq6063 84.2 2e-11 >seq72756 Length=1554 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 |||||||| |||| ||||| || |||||||| | |||||||| ||| || || | Sbjct 190 CCGGCGAAGATCAGGCGCTGCTGATCGGGAGGAATTCCCTCCTTATCCTGGATCTTGGCC 131 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 || || | | | | |||| |||||||||| | |||||| ||||| || || || Sbjct 130 TTCACATTCTCGATGGTGTCGGAGGCCTCCACCTCGAGGGTAATGGTCTTTCCGGTGAGT 71 Query 45317 GTCTTCACAAAGATTTGCATG 45337 ||||| || |||||||||||| Sbjct 70 GTCTTGACGAAGATTTGCATG 50 >seq6063 Length=776 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 45197 CCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGC 45256 |||||||| |||| ||||| || |||||||| | |||||||||||| ||| |||||| Sbjct 476 CCGGCGAAGATCAGGCGCTGCTGCTCGGGAGGAATTCCCTCCTTGTCCTGAATCTTTTGC 535 Query 45257 TTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGA 45316 || || | | | |||| || ||||| | ||| || ||||| || || ||| Sbjct 536 TTGACGTTCTCAATCGTGTCAGAGAGTTCAACCTCGAGGGTTATGGTCTTTCCGGTGAGA 595 Query 45317 GTCTTCACAAAGATTTGCATG 45337 |||||||| |||||| |||| Sbjct 596 GTCTTCACGTAGATTTTCATG 616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394719921959506