Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq23135 138 3e-28 >seq23135 Length=601 Score = 138 bits (152), Expect = 3e-28 Identities = 234/339 (69%), Gaps = 0/339 (0%) Strand=Plus/Minus Query 2678 CATATTGGCTTCCGCTTCGCGCTGTTTTACTTCCTGCTCGCGCTGCAGTGTTTTCTGGTT 2737 ||||| ||||| || | |||| |||||| |||| || || || || |||||||| Sbjct 344 CATATCAGCTTCTGCGTTCTTCTGTAGTACTTCTTGCTGACGTTGTAGAGTCTTCTGGTT 285 Query 2738 CGCCGTGACTTTGGCATTAATGCTGTCGATAACGGTTGGCGGGTACTCCGGCTTACCCAC 2797 ||| || ||||| || || || || ||| | ||| || || || ||||||| Sbjct 284 CGCAGTTACTTTTGCGTTGATAGAAGCGTCAACTGATGGAGGATATGAAGGTTTACCCAT 225 Query 2798 ATATGAGAGGCTCATTACCTGAATACCGATAGGTGTCATCTCTGCCTGAATGTCTTTAAG 2857 | || || || | | ||||||||| | || ||| || | ||||| ||||| || Sbjct 224 CCAAGATAGACTTAGAATCTGAATACCAACTGGACCCATTTCACCTTGAATATCTTTTAG 165 Query 2858 AGCTTCATCCAGCAGCTCAGACTTGCCGCCGTCGATAAATTTGTCAGTGGTCATTTTGCT 2917 || ||||| || || | | || || ||||||||||| | ||||| |||| || || Sbjct 164 TGCATCATCAAGTAGTTGTGCTTTACCACCGTCGATAAACTGATCAGTACTCATCTTACT 105 Query 2918 GGCCAGTCGGTTGAGTGCGTCGGCGATCTTCTGGCGCAGGTCAGTGTCGGTAATGTCATC 2977 | || ||| | |||| ||| ||||| || || || || || |||||||| ||||| Sbjct 104 ACCAAGACGGGTTAGTGAGTCACTAATCTTTTGACGTAGATCTGTATCGGTAATATCATC 45 Query 2978 CACGCCTTTGCGGTAGGTCTGAAACACCGTGGTAACTTT 3016 || ||||| ||||||||||| || || || |||| || Sbjct 44 TACACCTTTACGGTAGGTCTGGAATACAGTTTTAACCTT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135999131866884