Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq17487 86.0 6e-12 >seq17487 Length=3481 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 139624 ACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTG 139683 |||||| |||||||||| ||||||||||| || || || || ||||| ||| || Sbjct 155 ACCAGCGAAGATCAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGGATCTTAGC 214 Query 139684 TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAA 139743 || | | ||| | ||||||| || ||| ||||| | || | ||||| ||||| | Sbjct 215 CTTGACATTTTCGATGGTGTCGGAGGCCTCAACCTCGAGAGTGATAGTCTTTCCGGTGAG 274 Query 139744 CGTTTTTACGAATATTTGCATAGCT 139768 ||||| ||||| |||||||| ||| Sbjct 275 AGTTTTGACGAAGATTTGCATCGCT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495606467771200