Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_004629.1 Length=280334 Score E Sequences producing significant alignments: (Bits) Value seq20564 93.3 8e-14 >seq20564 Length=3816 Score = 93.3 bits (102), Expect = 8e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 260916 TATTAAATGGGCTAGATGGCATTGTTCCACTAGATGAGACTATGACCATTCTAACTACAA 260975 || |||| | |||||||| | || | |||||||| || | | ||||| || | Sbjct 1606 TACTAAACGTACTAGATGGTGTAGTATCCCTAGATGATACAGTTGTTTTCCTAACAACCA 1665 Query 260976 ACCATCCTGAGAATATTGATAAAGCACTTCTAAGGAAAGGTCGCGTTGATTACATGGTGG 261035 | |||| ||||| |||||| |||||| | | |||||||| ||||||||||| | Sbjct 1666 ATCATCTAGAGAAAATTGATGCAGCACTAATCCGTAAAGGTCGTGTTGATTACATTCACG 1725 Query 261036 AGATTCCATATCTACGAGATCAAGAAGTTAGGGAGTATATTAAACTAATGT 261086 ||||||||||||| ||| |||||||| ||||| || || ||||||| Sbjct 1726 AGATTCCATATCTTGAGGATGCAGAAGTTAAAGAGTACATCAAGCTAATGT 1776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 896113529076640