Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq27634 86.0 5e-12 >seq27634 Length=378 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 50599 TTACGCATACCGTACTTCAGAATGTCTGCACGCAGAGATTCCCAATCCATTTCTAGACC- 50657 ||||| || ||||| ||| ||| |||||||| |||| |||||||||||||| ||| | Sbjct 74 TTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAGTTCA 133 Query 50658 -TACGGATACCAACTCATCAACAGTTTTCTTATACGTGTCGATTACCAGGATTCCTTTGG 50716 ||| ||| | || ||||| | || || || || |||||| || | || | || Sbjct 134 GTAC--CTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATCGG 191 Query 50717 -ATGGTTTAGTACGATTAAACCATTCACATGCACCTTGCTCTTTGGCTAGACGTACAG-A 50774 | |||||| | | ||||||||||||| |||| |||||| || | |||||| | Sbjct 192 CGTATTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACAGAA 250 Query 50775 GGCTTTATGCAGGAAGTAGGACAATTTTTCAGC 50807 | ||| || ||| |||| ||| || |||||| Sbjct 251 GACTTGAT-TAGGTAGTAAGACCATGCTTCAGC 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389124957854006