Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq10303 131 2e-25 >seq10303 Length=766 Score = 131 bits (144), Expect = 2e-25 Identities = 217/308 (70%), Gaps = 8/308 (3%) Strand=Plus/Minus Query 112372 AAATCCGAGGTGGAGAAGTTAAGCACACAGGTGTTATTCCATTCCT--CAAAAAGTTTGA 112429 ||||||| ||||| || | || |||||| | ||||||||||| || |||| | Sbjct 733 AAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCATTCCTTTCAGCAAGTACTA 674 Query 112430 AGCAACTGTCAGATGCTGCACTCAAAATGGCATCCGTGGTGGATCAGCAACTGTCCACTT 112489 | |||||| | || || | ||| |||| | |||||||| |||||||| | ||||| Sbjct 673 A--AACTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGTGCAGCAACTATTCACTT 616 Query 112490 CCCGATCTGGCACCAAGAAATCGAAGACATCATTGTATTAAAGAATAATAAAGGAACTGA 112549 ||| | ||||| | |||| | ||| || | | ||| |||||||||| ||||||||||| Sbjct 615 CCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAGAATAACAAAGGAACTGA 556 Query 112550 AGATAATCGAGTTCGTAAACTAGACTACTCAATTCAGATTAGCAAACTATTCTATGAACG 112609 | ||| || |||||| || ||||| | | || | | |||||| | |||||||| Sbjct 555 ATTTAACCGTGTTCGTCAAAGTGACTATTGCTTCCAAGTAAACAAACTTCTTTATGAACG 496 Query 112610 ATTCATCTCAAACGGAGAAATCT--CCCTCTTCTCTCCACATGATGTTCCTGGTTTGTAT 112667 | | || ||||| ||||| | | ||||||| || ||||| || ||| | ||| Sbjct 495 -TCTAACT-AAACGTGGAAATATTACTTTCTTCTCACCGTCAGATGTACCGGGTCTATAT 438 Query 112668 GATGCTTT 112675 ||||| || Sbjct 437 GATGCATT 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627388809414400