Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq48909 84.2 2e-11 seq44171 82.4 8e-11 seq25243 82.4 8e-11 seq22819 82.4 8e-11 seq20451 82.4 8e-11 seq264 82.4 8e-11 seq123 82.4 8e-11 >seq48909 Length=1661 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 |||||||| |||||| |||| | ||| |||||| |||||| | ||||||| || | Sbjct 719 ATGAAAAAAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGA 778 Query 57055 TACTCACCACTATACTACCGAGGA 57078 |||||||||||||||||||||||| Sbjct 779 TACTCACCACTATACTACCGAGGA 802 >seq44171 Length=1586 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| ||||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 88 AAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 147 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 148 CACCACTATACTACCGAGGA 167 >seq25243 Length=1048 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| ||||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 394 AAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 453 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 454 CACCACTATACTACCGAGGA 473 >seq22819 Length=4735 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 1090 AAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 1149 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 1150 CACCACTATACTACCGAGGA 1169 >seq20451 Length=6458 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 3920 AAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 3861 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 3860 CACCACTATACTACCGAGGA 3841 >seq264 Length=1629 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| |||||| |||| ||||| |||||| |||||| | ||||||| || ||||| Sbjct 820 AAAAAATTCTCCCCGGCCGGAAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 879 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 880 CACCACTATACTACCGAGGA 899 >seq123 Length=1210 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||| |||| | ||| |||||| |||||| | ||||||| || ||||| Sbjct 1015 AAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACT 956 Query 57059 CACCACTATACTACCGAGGA 57078 |||||||||||||||||||| Sbjct 955 CACCACTATACTACCGAGGA 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542711781254240