Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq27634 93.3 3e-14 >seq27634 Length=378 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/205 (72%), Gaps = 12/205 (6%) Strand=Plus/Plus Query 54250 GTTGCGCATACCATATTTCAGAATATCTGCACGCAGAGATTCCCAATCCATTTCTAGACC 54309 ||| || || || |||||| |||||||||||| |||| |||||||||||||| ||| Sbjct 73 GTTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAG--- 129 Query 54310 TACAGT---TACCAGTTCATCAACAGTTTTCTTGTACGTGTCGATTACCAGAGTTCCTT- 54365 | |||| ||| ||||| ||||| | || ||||| || |||||| || || | Sbjct 130 TTCAGTACCTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATC 189 Query 54366 -GCGAAGGCTTAGTACGATTAAACCAGTCACATGCACCTTGTTCTTTAGCCAGACGTACA 54424 ||| | ||||| | | |||||| |||||| |||| |||||||||| ||||| Sbjct 190 GGCGTA-TTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACA 247 Query 54425 G-AGGCTTTATGTAGGAAGTAGGAC 54448 | || ||| || |||| |||| ||| Sbjct 248 GAAGACTTGAT-TAGGTAGTAAGAC 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355977193370678