Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2257 118 1e-21 >seq2257 Length=6083 Score = 118 bits (130), Expect = 1e-21 Identities = 206/300 (69%), Gaps = 0/300 (0%) Strand=Plus/Plus Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGC 94143 ||||| || ||||| ||||| || |||| |||||||| |||| ||||||| | || ||| Sbjct 2601 ACCAACGGTACCTCGAACGGACTGATCCCCATGCTCCGTGTCTACAACAACACCGCTCGC 2660 Query 94144 TACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGG 94203 |||||||| ||||| || | | | ||| | ||||| |||| |||||||||||| Sbjct 2661 TACGTGGATCAGGGAGGCAACAAGCGTCCGGGAGCCTTCGCCATCTACCTCGAGCCCTGG 2720 Query 94204 CACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGG 94263 |||||||| | | ||| | ||| | |||||| || || ||||||| Sbjct 2721 CACGCGGATATCTTTGAGTTCGTGTCGCTGAGGAAGAACACTGGGCCTGAGGAGGAGAGG 2780 Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323 ||| | || || ||| || |||||||| || || || || ||||| | || | | Sbjct 2781 GCCCGCGATCTGTTCCTGGCCCTCTGGGTTCCGGATCTCTTCATGAAGAGGGTTTCGGAT 2840 Query 94324 AACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTTTGTGGA 94383 || ||| |||| || | || ||| || || ||||||||| |||||| || ||| Sbjct 2841 GACGCCGACTGGGCCCTGATGTGCCCCCGCGAGTGCCCCGGACTGGACGACGTCTGGGGA 2900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494266904424560