Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2257 98.7 1e-15 >seq2257 Length=6083 Score = 98.7 bits (108), Expect = 1e-15 Identities = 222/326 (68%), Gaps = 11/326 (3%) Strand=Plus/Minus Query 153833 GTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892 ||| ||| ||||||||| || || || |||| | || ||||| |||| | || || Sbjct 2921 GTAGAGTTTCTCAAACTCCTCTCCCCAGACGTCGTCCAGTCCGGGGCACTCGCGGGGGCA 2862 Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952 |||||| | ||| |||| | || | |||||| |||||||| |||||||| Sbjct 2861 CATCAGGGCCCAGTCGGCGTCATCCGAAACCCTCTTCATGAAGAGATCCGGAACCCAGAG 2802 Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCA-TGTTGCGTTTCAGATTGA 154011 || | || ||||| ||| | ||||| | ||||| |||| |||| || Sbjct 2801 GGCCAGGAACAGATCGCGGGCCCTCTCCTCCTCAG-GCCCAGTGTTCTTCCTCAGC--GA 2745 Query 154012 GCACG--CT-ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTAC 154068 |||| || | |||| || ||||||||||| || | ||||| ||| | ||| || || Sbjct 2744 -CACGAACTCAAAGATATCCGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCTCCCGGAC 2686 Query 154069 GC---TTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTT 154125 || || || |||||||| |||| ||| | | |||||| |||| || | |||||| Sbjct 2685 GCTTGTTGCCTCCCTGATCCACGTAGCGAGCGGTGTTGTTGTAGACACGGAGCATGGGGA 2626 Query 154126 CCAGGCCGCTTGCGGTGCCGTTGGTC 154151 ||| ||| | | ||| ||||||||| Sbjct 2625 TCAGTCCGTTCGAGGTACCGTTGGTC 2600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495804684781920