Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq17487 98.7 9e-16 >seq17487 Length=3481 Score = 98.7 bits (108), Expect = 9e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 126974 CCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC 127033 |||||| |||||| |||||||||||||| || || |||||||||||| ||| || | Sbjct 156 CCAGCGAAGATCAGACGCTGCTGATCGGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCC 215 Query 127034 TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGA 127093 |||| | ||||| |||||| | ||| || |||| || | || || ||||| ||| Sbjct 216 TTGACATTTTCGATGGTGTCGGAGGCCTCAACCTCGAGAGTGATAGTCTTTCCGGTGAGA 275 Query 127094 GTTTTTACAAAAATCTGCATGGCT 127117 ||||| || || || ||||| ||| Sbjct 276 GTTTTGACGAAGATTTGCATCGCT 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475062233724640