Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq10303 147 2e-30 >seq10303 Length=766 Score = 147 bits (162), Expect = 2e-30 Identities = 163/215 (76%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 41257 TTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTT 41316 |||| ||| | | |||| |||||||||||||||| || || ||||| ||| ||||||| | Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 41317 TC-TGGAAACATATCCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTGGT 41375 || | | || | | || |||||||||| |||||||| |||||||||||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAA-CTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGT 633 Query 41376 GCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGAAG 41435 || ||||| | | | || | |||||||| ||| ||||||||||| | || | ||| Sbjct 632 GCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAG 573 Query 41436 AACAACAAAGGCGTAGAAGAAAACCGCGTTCGTCA 41470 || |||||||| ||| ||||| |||||||| Sbjct 572 AATAACAAAGGAACTGAATTTAACCGTGTTCGTCA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557552480669760