Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq10303 116 4e-21 >seq10303 Length=766 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41306 TTCGCGCTATGGGTTCAAAAATCCGTGGTGGTGAAGCAGTCCATACAGGCGTTATCCCGT 41365 |||| || | | ||| |||||||||||||||| ||||| |||||||| | || || | Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 41366 TC-TGGAAACACATTCAGACGGCGGTTAAATCTTGTTCCCAGGGTGGCGTTCGTGGTGGT 41424 || | | || | | | | |||||||| ||||| || |||||||||||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAA-CTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGT 633 Query 41425 GCAGCAACCCTGTATTATCCGATCTGGCATCTTGAAGTTGAAAACCTGCTGGTTCTGAAA 41484 |||||||| | | | || | |||||||| ||| |||||||||| | || || || Sbjct 632 GCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAG 573 Query 41485 AATAACCGTGGCGTTGAAGAAAACCGTATTCGTCACCTGGACTATGGC 41532 |||||| || |||| |||||| ||||||| |||||| || Sbjct 572 AATAACAAAGGAACTGAATTTAACCGTGTTCGTCAAAGTGACTATTGC 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565071938882880