Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq41502 102 9e-17 >seq41502 Length=4250 Score = 102 bits (112), Expect = 9e-17 Identities = 286/426 (67%), Gaps = 21/426 (5%) Strand=Plus/Minus Query 67716 TTTGAACGGACGAATCATATCAAAGTTTTGTTTAAAGCGTTTGACATAATCTGTCTTTCC 67775 |||||| || |||||||| ||| ||| || || || |||||||| || || Sbjct 1855 TTTGAAAGGTTTAATCATATGTTGATTTGCTTTGAAACGATTCACATAATCATCCTCACC 1796 Query 67776 AAGTTTCTTATGCATTGCAACTATCTTATGGTAGTTTTCCCATGCATATTCACGAAACCA 67835 || | | || |||| || |||| | |||| | | || ||||||| ||||| Sbjct 1795 AAACTCACGGTACAAAGCAATTACTTTATAGAAGTTCTGATAAGCGAATTCACGGAACCA 1736 Query 67836 GCCAGATGTAATGCTAGTACAAACTTTTTCCAAAGCGTACATAA---ATGAACCCGTAGG 67892 ||| ||||| |||||||| ||||| | ||| ||||| ||| | |||| Sbjct 1735 ACCACTAGTAATACTAGTACAGACTTTAGATAGAGC---CATAACGAATGCTTGCTTAGG 1679 Query 67893 GTCTGGGTTGA-AATTATTTGGAATTTGATGGCGTTCTAAAGCAAGTACACAAGTTTCTT 67951 | | |||||| ||| || ||| | ||||||| |||||||||||||| |||| Sbjct 1678 -TGTTGGTTGATAATCGAACGGGATTAGGCAACGTTCTAGTGCAAGTACACAAGTCTCTT 1620 Query 67952 CATATACACCT-GCAA--GCTTAAGTTCTTCAGGAAGAGAATCGAACTTCTCTTTTGAAG 68008 | ||||| ||| | || | |||| || || | ||||| |||||||||||| Sbjct 1619 CGTATACTCCTAGTAATTGTTTAA--TC-TCGGAAAGAGCGAAGAACTTCTCTTTATCTA 1563 Query 68009 TCATTACTTCAGAGCCATCTTTCATGTAGAAAGTATAAGCAGG-ACGACCAGCTAA-AGC 68066 ||||||||| | |||||||||||||| | || ||||| | ||| ||| ||| Sbjct 1562 CCATTACTTCCGCACCATCTTTCATGTACTCTTTGTACGCAGGTGCATCCA--TAATAGC 1505 Query 68067 CACTGCTTCATGAATTGAATCGTGGTCATAGATGTAA---AAATCATCTTTAAAGAAAGA 68123 | || |||||||| | ||| ||||||||||| ||| | ||||||| ||||| | Sbjct 1504 AATCGCCTCATGAATAGTATCATGGTCATAGATATAACCCACTTCATCTTGGAAGAAGGT 1445 Query 68124 ATCTTT 68129 ||||| Sbjct 1444 TTCTTT 1439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529111536680000