Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_015269.1 Length=118351 Score E Sequences producing significant alignments: (Bits) Value seq27634 84.2 2e-11 >seq27634 Length=378 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 49320 GTTACGCATACCATATTTCAGAATATCTGCACGCAGAGACTCCCAATCCATTTCTAGACC 49379 |||||| || || |||||| |||||||||||| |||| ||||||||||||| ||| | Sbjct 73 GTTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAGTTC 132 Query 49380 --TACGGATACCAGTTCATCAACAGTTTTCTTATACGTGTCGATTACTAGAATTCCTTTA 49437 ||| ||| ||||| ||||| | || || || || |||||| || | || | Sbjct 133 AGTAC--CTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATCG 190 Query 49438 G-ATGGTTTAGTACGATCAAACCACTCACATGCACCCTGTTCTTTAGCTAGGCGTACAGA 49496 | | |||||| | |||||||| |||||| || | |||||||| | ||||||| Sbjct 191 GCGTATTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACAGA 249 Query 49497 GGCTTTGTGCAGGAAGTAAGA 49517 | ||| ||| ||||||| Sbjct 250 AGACTTGATTAGGTAGTAAGA 270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378257938999952