Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq10303 91.5 2e-13 >seq10303 Length=766 Score = 91.5 bits (100), Expect = 2e-13 Identities = 164/238 (69%), Gaps = 4/238 (2%) Strand=Plus/Minus Query 156486 ATCCGAGGTGGAGAAGTTCAACACACAGGTGTTGTCCCTTTCCT--CAAAAAGTTTGAAA 156543 ||||| ||||| || | ||| |||||| | | || ||||| || |||| ||| Sbjct 731 ATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCATTCCTTTCAGCAAGTACTAAA 672 Query 156544 GCACTGTCAGATGCTGCACTCAAAATGGCATCCGAGGTGGATCAGCGACTGTCCACTTCC 156603 ||||| | || || | ||| |||| | || ||||| |||| ||| | ||||||| Sbjct 671 --ACTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGTGCAGCAACTATTCACTTCC 614 Query 156604 CAATCTGGCACGCAGAAATAGAGGACATTTTAGTCCTTAAGAATAATAAAGGAACTGAAG 156663 || | ||||| |||| | || || || |||| || |||||||| |||||||||||| Sbjct 613 CACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAGAATAACAAAGGAACTGAAT 554 Query 156664 ATAATCGTGTCCGTAAACTAGACTACAGTATTCAAATTTCTAAACTGTTCTATGAACG 156721 ||| ||||| ||| || ||||| | | ||| | ||||| | |||||||| Sbjct 553 TTAACCGTGTTCGTCAAAGTGACTATTGCTTCCAAGTAAACAAACTTCTTTATGAACG 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563140921552640