Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq10303 158 8e-34 >seq10303 Length=766 Score = 158 bits (174), Expect = 8e-34 Identities = 328/479 (68%), Gaps = 12/479 (3%) Strand=Plus/Minus Query 71318 TTCGTGCATTAGGAAGTCCTATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCAT 71377 |||||||||||| | || || |||||| ||||| ||||| ||||| || |||| Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 71378 TC-TTAAAGCATTTCCAAACAGCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGT 71436 || || |||| | | || | | || ||||| || || || || ||| | ||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAA-CTGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTGGT 633 Query 71437 GCTGCTACAGCGTTCTACCCTATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAA 71496 || || || || ||| | |||||| ||||| |||||| |||| ||||| | || Sbjct 632 GCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAAAG 573 Query 71497 AATAACAAAGGTGTTGAAGATAACCGTGTACGTCATTTAGACTA-TGCTGTGCAATTCAA 71555 ||||||||||| |||| ||||||||| ||||| ||||| |||| | ||| | || Sbjct 572 AATAACAAAGGAACTGAATTTAACCGTGTTCGTCAAAGTGACTATTGCT-TCCAAGTAAA 514 Query 71556 TAAGCTTATGTACCAACGATTGATTACAGGTGGCAATATTACATTGTTCTCACCTAATGC 71615 || ||| | || |||| | | || | |||| |||||||| || |||||||| | Sbjct 513 CAAACTTCTTTATGAACGTCTAACTAAACGTGGAAATATTACTTTCTTCTCACC---GTC 457 Query 71616 AGTTGAA---GGTTTATATGACTCATTCTTTGCCGACCAAGATAAGTTTGAAAAGT-TAT 71671 || || | ||| ||||||| |||||| ||| || ||| | | || ||| || | | Sbjct 456 AGATGTACCGGGTCTATATGATGCATTCTGTGCTGATCAA-AAAGAATTCAAACGTCTTT 398 Query 71672 ATACTGAAGCTGAAGGTAATCCTATGATTATCCAAAAGTCAGTAAAAGCTAGTGACTTAT 71731 || || ||||| | || || ||| | || |||||| ||||| ||| | | Sbjct 397 ATGAAAAATATGAAGCTGATAGTAGTATTCGTAAGAAATCAGTACCAGCTATTGATGTGT 338 Query 71732 TTACATTGTTTGCACAAGAGCGAGCAGGTACAGGTCGTATCTATCTTCAAAACGTAGAT 71790 |||| | ||| | || |||| || |||||||||||| |||| || ||||| Sbjct 337 TTACTAGCCTAATGCAACAACGTGCAGAAACGGGTCGTATCTATATTCAGAATATAGAT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335368542728362