Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq10303 82.4 9e-11 >seq10303 Length=766 Score = 82.4 bits (90), Expect = 9e-11 Identities = 195/293 (67%), Gaps = 4/293 (1%) Strand=Plus/Minus Query 151683 CACACAGGTGTTGTTCCTTTCCTTAAA--AAGTTTGAATCAACTGTACGATGCTGCACAC 151740 || |||||| | |||| |||||| | |||| || |||||| || || ||| Sbjct 710 CATACAGGTTTGATTCCATTCCTTTCAGCAAGTACTAA--AACTGTTAAATCATGTTCAC 653 Query 151741 AAAATGGGATTCCGGGGGGATCAGCAACAGTCCACTTCCCAATCTGGCACCAAGAGATAG 151800 || ||| ||| || || ||||||| | ||||||||| | ||||| | ||| | | Sbjct 652 AAGGTGGCGTTCGTGGTGGTGCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTG 593 Query 151801 AAGATATTATTGTTCTCAAAAACAATAAGGGCACAGAAGATAATCGAGTGAGGAAACTTG 151860 || | || | || || || || || || || || ||| ||| || || | || || Sbjct 592 AAAACCTTGTAGTACTAAAGAATAACAAAGGAACTGAATTTAACCGTGTTCGTCAAAGTG 533 Query 151861 ACTACTCCATCCAAATTTCAAAACTTTTCTACGAGCGTTTCATTGCGAATGGAGAGATTA 151920 |||| | | ||||| | |||||| | || || ||| | | | |||| | |||| Sbjct 532 ACTATTGCTTCCAAGTAAACAAACTTCTTTATGAACGTCTAACTAAACGTGGAAATATTA 473 Query 151921 GCCTCTTCTCACCGCATGACGTACCAGGTCTCTATGATGCTTTTGGTACTGAT 151973 ||||||||||| || ||||| ||||| |||||||| || || ||||| Sbjct 472 CTTTCTTCTCACCGTCAGATGTACCGGGTCTATATGATGCATTCTGTGCTGAT 420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562690137705680