Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq23135 125 3e-24 >seq23135 Length=601 Score = 125 bits (138), Expect = 3e-24 Identities = 309/466 (66%), Gaps = 2/466 (0%) Strand=Plus/Plus Query 15162 ACTGTGTTCCAGACGTACCGTAAGGGCGTTGACGACATCACGGACACTGACCTGCGTCAG 15221 ||||| |||||||| |||||||| || || || || || || || || || || ||||| Sbjct 15 ACTGTATTCCAGACCTACCGTAAAGGTGTAGATGATATTACCGATACAGATCTACGTCAA 74 Query 15222 AAAATCAGTGACTCACTGAATCGCCGCAGCAGCATGATGAACACTGATAAGTTCATTGAT 15281 || || ||||||||||| | || | | || | ||||| |||||| |||| || || Sbjct 75 AAGATTAGTGACTCACTAACCCGTCTTGGTAGTAAGATGAGTACTGATCAGTTTATCGAC 134 Query 15282 GGCGGCAAAG-GCGACATCCTGACCGGTGTACTGTCTGACCTGCAGAAAGAGATGGGGCC 15340 || || |||| | || | ||| | || ||| || | || || ||||| || Sbjct 135 GGTGGTAAAGCACAACTACTTGA-TGATGCACTAAAAGATATTCAAGGTGAAATGGGTCC 193 Query 15341 GGTAGGCATCGAAGTCCTCAGCGTGAGCTGGATGGGCAAGCCTGACTACCCGCCGACTGT 15400 || || || | | || || | |||||||| || ||| || || || | || Sbjct 194 AGTTGGTATTCAGATTCTAAGTCTATCTTGGATGGGTAAACCTTCATATCCTCCATCAGT 253 Query 15401 TATCGAAAGCATTAATGCCAAGGTAACGGCAAACCAGAAAACTCTGCAGCGTGAGCAGGA 15460 | || || || || || ||||| || |||||||| ||||| || ||| |||| || Sbjct 254 TGACGCTTCTATCAACGCAAAAGTAACTGCGAACCAGAAGACTCTACAACGTCAGCAAGA 313 Query 15461 AGTAAAACAGCGTGACGCCGAAGCAAACATGCTGCGTGCAGAAGCTGCCGGTCAGGCTGA 15520 |||| |||| |||| ||||| | ||| ||| | ||||| || || || || Sbjct 314 AGTACTACAGAAGAACGCAGAAGCTGATATGGCTCGTTCTGAAGCAAAAGGCCAAGCAGA 373 Query 15521 TGCAAAACTGGCGCTGGCGAATGCCGAAGCCAAGTCCATCGAAATCCGTGGTAAAGCTCT 15580 ||| ||||| || || | || ||||| || |||||||| | ||| | || || Sbjct 374 TGCCAAACTACTCCTAGCTGAAGCTGAAGCAAAAAGTATCGAAATTCTAGGTGACGCACT 433 Query 15581 GCGTGAAAACCCAGAGATTATGAACCTGGAAGCCATCAATAAGTGG 15626 ||| ||||| |||| ||| |||| |||| ||| | || ||| Sbjct 434 ACGTAAAAACGCAGACGTTAAAGACCTAAAAGCAATCGAAAAATGG 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238601240681980