Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq30457 82.4 5e-11 >seq30457 Length=12079 Score = 82.4 bits (90), Expect = 5e-11 Identities = 186/279 (67%), Gaps = 3/279 (1%) Strand=Plus/Minus Query 78401 AATGAAGTCTCCTACTTCCAGTCCGCACAAATGCGCAATAATATGTGTAAGTAATGCGTA 78460 |||||| || || ||||| || || || | || || | ||||| || |||| | ||| Sbjct 2240 AATGAACTCACCAACTTCTAGACCACAAACTTGAGCTAACATATGAGTTAGTAGAGAGTA 2181 Query 78461 TGAAGCAATGTTAAATGGAATTCCTAAGAATACGTCACCGCTTCGTTGGTACAATTGGCA 78520 ||||||||||||||||| |||| ||||| || | || ||||| || | || Sbjct 2180 ACTAGCAATGTTAAATGGAACACCTAGGAATAAATCTGCACTACGTTGATATAGAGTACA 2121 Query 78521 ACTTAGCTTTCCATCAACTGATACGTAAAACTGGAATAGAGTGTGACAAGGCGGTAGTGC 78580 || || || || || |||| | ||||| | | | | ||||| || ||||| || Sbjct 2120 GGAAAGTTTGCCGTCCAC---TACGAAGAACTGAGAGAAACTATGACAGGGTGGTAGAGC 2064 Query 78581 CATATCATCTAAGTCAGCAGGATTCCAAGCAGACACAATATGTCTGCGTCCGTAAGGGTC 78640 ||| | ||||| ||| | ||||| ||||| | |||||| | ||| | | |||| Sbjct 2063 CATCTTATCTAGATCACCCACGTTCCATGCAGATAGAATATGGCGGCGATCATTTGGGTT 2004 Query 78641 TTTCATAATAGATTCTATTACATTAGCTATTTGGTCAAT 78679 || | | || |||| | |||||||||||||| Sbjct 2003 ATTTTTCAACCCATCAATTAGACACGCTATTTGGTCAAT 1965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299890076054800