Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_019909.1 Length=168809 Score E Sequences producing significant alignments: (Bits) Value seq41502 96.9 4e-15 >seq41502 Length=4250 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 68398 AACGCTCTAAAGCTAATACACATGCTTCTTCATATACGCCAGCTAACTGAATTTCTTTAG 68457 |||| |||| || | |||||| | ||||| ||||| || ||| || || | | | Sbjct 1649 AACGTTCTAGTGCAAGTACACAAGTCTCTTCGTATACTCCTAGTAATTGT-TTAATCTCG 1591 Query 68458 GTA-GAGCCATGAACTTCTCTTTAGAAGTCATTACTTGAGAATCATCTTTCATGTAATAT 68516 | | |||| | ||||||||||||| |||||||| | | ||||||||||||| | | Sbjct 1590 GAAAGAGCGAAGAACTTCTCTTTATCTACCATTACTTCCGCACCATCTTTCATGTACTCT 1531 Query 68517 TTGTATGCTGGCTGATCAATTAATGCAATAGCTTCATGAATTGTATCATGGTCGTATGTA 68576 ||||| || || ||| || | ||||| || |||||||| ||||||||||| || || Sbjct 1530 TTGTACGCAGGTGCATCCATAATAGCAATCGCCTCATGAATAGTATCATGGTCATAGATA 1471 Query 68577 TA 68578 || Sbjct 1470 TA 1469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539562688422640