Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq27634 86.0 5e-12 >seq27634 Length=378 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/200 (72%), Gaps = 10/200 (5%) Strand=Plus/Plus Query 52181 GTTACGCATACCATATTTCAGGATGTCTGCTCTCAGAGTTTCCCAATCCATTTCCAGACC 52240 |||||| || || |||||| || ||||| | ||||||||||||||||||| || Sbjct 73 GTTACGAATGCCGTATTTCGCAATATCTGCACGTAGAGTTTCCCAATCCATTTTTAG--- 129 Query 52241 TACAGT---TACCAGTTCATCAACTGATTTCTTGTAGGTATCGATTACTAGAATTCCTTT 52297 | |||| ||| ||||| |||||||| || ||||| ||||||||| || | || | Sbjct 130 TTCAGTACCTACTAGTTCGTCAACTGACTTTTTGTATGTATCGATTGGAAGTACACCATC 189 Query 52298 AG-ATGGTTTAGTACGATTAAACCAATCACAAGCTCCTTGTTCCTTAGCTAAGCGTACAG 52356 | | |||||| | | |||||| ||||| |||| || ||||| || |||||| Sbjct 190 GGCGTATTTTAGTTTG-TCAAACCATTCACATTTGCCTTTCTCTTTAGCCAACTGTACAG 248 Query 52357 ATG-CTTTATGTAGGAAGTA 52375 | | ||| || |||| |||| Sbjct 249 AAGACTTGAT-TAGGTAGTA 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392149435593322