Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq10303 149 7e-31 >seq10303 Length=766 Score = 149 bits (164), Expect = 7e-31 Identities = 165/217 (76%), Gaps = 6/217 (3%) Strand=Plus/Minus Query 40620 TTCGCGCAATGGGTTCTAAAATCCGTGGTGGTGAAGCTGTTCATACTGGTGTGATTCCTT 40679 |||| ||| | | |||| |||||||||||||||| || || ||||| ||| ||||||| | Sbjct 751 TTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATACAGGTTTGATTCCAT 692 Query 40680 TC-TGGAAACA--TATTCAAACCGCTGTTAAATCCTGTTCACAGGGTGGCGTTCGTGGTG 40736 || | | || || | |||| ||||||||| |||||||| |||||||||||||||| Sbjct 691 TCCTTTCAGCAAGTACTAAAAC---TGTTAAATCATGTTCACAAGGTGGCGTTCGTGGTG 635 Query 40737 GTGCTGCAACACTGTATTATCCTTTCTGGCATCTGGAAGTTGAAAACCTTCTGGTGTTGA 40796 |||| ||||| | | | || | |||||||| ||| ||||||||||| | || | | Sbjct 634 GTGCAGCAACTATTCACTTCCCACTATGGCATCTAGAATTTGAAAACCTTGTAGTACTAA 575 Query 40797 AGAACAACAAAGGCGTAGAAGAAAACCGCGTTCGTCA 40833 |||| |||||||| ||| ||||| |||||||| Sbjct 574 AGAATAACAAAGGAACTGAATTTAACCGTGTTCGTCA 538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557478948552880