Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq10303 100 4e-16 >seq10303 Length=766 Score = 100 bits (110), Expect = 4e-16 Identities = 210/306 (69%), Gaps = 8/306 (3%) Strand=Plus/Plus Query 117970 AAAGCATCGTACAAACCTGGGACATCGTGA-GGTGAGAATAGGCTGATGTCTCCATCTTG 118028 || ||||| || | ||| || ||||| ||| |||||||| | | || | |||| || Sbjct 430 AATGCATCATATAGACCCGGTACATC-TGACGGTGAGAAGAAAGTAATATTTCCACGTTT 488 Query 118029 GATGAATCGTTCATAGAACAGTTTGCTTAATTGAATACTGTAGTCTAGTTTG-CGAACAC 118087 | | |||||||| | |||||| ||| ||| | | ||||| | |||| ||||||| Sbjct 489 AGTTAGACGTTCATAAAGAAGTTTGTTTACTTGGAAGCAATAGTC-ACTTTGACGAACAC 547 Query 118088 GATTGTCCTGGGTTCCTTTGTTGTTCTTCAGGACAATGATGTCCTCTATTTCTTGGTGCC 118147 | || | ||||||||||| ||||| || || | | || || | |||| | |||| Sbjct 548 GGTTAAATTCAGTTCCTTTGTTATTCTTTAGTACTACAAGGTTTTCAAATTCTAGATGCC 607 Query 118148 AGATTGGGAAGTGGACAGTTGCGCTTCCACCGCGAATGCCATTTTGAGTGCAGCATCTGA 118207 | | ||||||||| | |||||| ||||| |||| |||| ||| | || || | | Sbjct 608 ATAGTGGGAAGTGAATAGTTGCTGCACCACCACGAACGCCACCTTGTGAACATGATTTAA 667 Query 118208 CAGTGCTCTCAAATTTTTTG--AGGAATGGAATAACACCTGTGTGCGCGACTTCTCCACC 118265 |||| | | | || || ||||||||||| | |||||| || | | || ||||| Sbjct 668 CAGT--TTTAGTACTTGCTGAAAGGAATGGAATCAAACCTGTATGTACTGCGTCACCACC 725 Query 118266 TCGGAT 118271 ||||| Sbjct 726 ACGGAT 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632929294568880