Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq10303 95.1 1e-14 >seq10303 Length=766 Score = 95.1 bits (104), Expect = 1e-14 Identities = 221/326 (68%), Gaps = 18/326 (6%) Strand=Plus/Plus Query 76349 TTCATCAGTACCAAAAGCATCATACAGACCTGGCACATC-----GTGAGGACTGAATAGT 76403 || ||||| || || |||||||| ||||| || ||||| ||||| | ||| ||| Sbjct 417 TTGATCAGCACAGAATGCATCATATAGACCCGGTACATCTGACGGTGAGAA--GAA-AGT 473 Query 76404 GAGATCTCTCCGTTACTGATGAATCGTTCATAGAAGAGTTTACTAATTTGAATGCTATAG 76463 | || || |||| | | | |||||||| | ||||| | | ||| | || |||| Sbjct 474 AATATTTCCACGTT--TAGTTAGACGTTCATAAAGAAGTTTGTTTACTTGGAAGCAATAG 531 Query 76464 TCTAACTT--ACGAACTCGGTTGTCCTCAGTTCCTTTATTATTTTTAAGGACTAGGATGT 76521 || |||| |||||| ||||| ||||||||||| ||||| || || |||| | || Sbjct 532 TC--ACTTTGACGAACACGGTTAAATTCAGTTCCTTTGTTATTCTTTAGTACTACAAGGT 589 Query 76522 CTTCTATTTCTTGGTGCCAGATAGGAAAGTGAACTGTAGCAGAACCACCTCGGATGCCGT 76581 ||| | |||| | ||||| | || ||||||| || || | |||||| || | ||| Sbjct 590 TTTCAAATTCTAGATGCCATAGTGGGAAGTGAATAGTTGCTGCACCACCACGAACGCCAC 649 Query 76582 TTTGTGTGCAGCATCGTACAGTTGATTCAAACTT--TTTAAGGAAGGGGACAACACCTGT 76639 ||||| || || |||||| || |||| | |||||| || | | |||||| Sbjct 650 CTTGTGAACATGATTTAACAGTT--TTAGTACTTGCTGAAAGGAATGGAATCAAACCTGT 707 Query 76640 GTGTTGTACCTCTCCGCCTCTGATTT 76665 ||| | | || || || | ||||| Sbjct 708 ATGTACTGCGTCACCACCACGGATTT 733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571526779925520