Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq10303 123 2e-23 >seq10303 Length=766 Score = 123 bits (136), Expect = 2e-23 Identities = 329/493 (67%), Gaps = 10/493 (2%) Strand=Plus/Minus Query 9399 TTAACGCGGGTCGTATCCGAGCATTAGGTTCTGAGATTCGTGGTGGTGAAGCGGTACATA 9458 ||||| |||||| | || ||||||| |||||| || ||||||||||| || ||||||| Sbjct 766 TTAACTACGGTCGTGTTCGTGCATTAGATTCTGAAATCCGTGGTGGTGACGCAGTACATA 707 Query 9459 CTGGTTGTATCCCATT-CTACAAACACTTCCAAACAGCAGTGAAATGTTGTAGCCAAGGC 9517 | |||| || ||||| || | || | | || | | || |||| ||| ||||| Sbjct 706 CAGGTTTGATTCCATTCCTTTCAGCAAGTACTAA-AACTGTTAAATCATGTTCACAAGGT 648 Query 9518 GGTGTTCGTGGCGGCGCGGCAACGGTATT--CTACCCAATGTGGCACCTAGAGTACAAAT 9575 || |||||||| || || ||||| |||| || |||| | ||||| ||||| | || Sbjct 647 GGCGTTCGTGGTGGTGCAGCAAC--TATTCACTTCCCACTATGGCATCTAGAATTTGAAA 590 Query 9576 CACTAATCGTACTCAAGAACAACCGTGGTATCGAAGAAAACCGTGTACGTCATATGGACT 9635 || | ||||| ||||| ||| || | ||| |||||||| ||||| | |||| Sbjct 589 ACCTTGTAGTACTAAAGAATAACAAAGGAACTGAATTTAACCGTGTTCGTCAAAGTGACT 530 Query 9636 ACGGTGTACAAATTAATGGCCTGATGTATAAGCGTCTGCTGTCTGGTCAGAACATCACTT 9695 | | | ||| | || || | ||| | ||||| || || || |||| Sbjct 529 ATTGCTTCCAAGTAAACAAACTTCTTTATGAACGTCTAACTAAACGTGGAAATATTACTT 470 Query 9696 TATTCTCACC-TCATAGTGTACCGGGTCTATACGATGCATACTTCGAAGACCAAGATAAG 9754 | |||||||| ||| | ||||||||||||||| ||||||| || | || ||| | | Sbjct 469 TCTTCTCACCGTCAGA-TGTACCGGGTCTATATGATGCATTCTGTGCTGATCAAAAAGAA 411 Query 9755 TTCGAGCGACTGTACACCAAAGCGGAATCTGAT-CCATCAATCGAAAAAGACACAATCTC 9813 ||| | || || || ||| ||| ||||| | | ||| || | | || | | Sbjct 410 TTCAAACGTCTTTATGAAAAATATGAAGCTGATAGTAGTATTCGTAAGA-AATCAGTACC 352 Query 9814 TGCTAAGGAAGCATTCAGCATACTAATGCAAGAGCGTGCTTCTACAGGTCGCATCTACAT 9873 |||| || | || | | ||||||||| | ||||| || ||||| ||||| || Sbjct 351 AGCTATTGATGTGTTTACTAGCCTAATGCAACAACGTGCAGAAACGGGTCGTATCTATAT 292 Query 9874 TCAGCACGTAGAT 9886 |||| | ||||| Sbjct 291 TCAGAATATAGAT 279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342664375921934