Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq72756 91.5 1e-13 seq35470 87.8 2e-12 >seq72756 Length=1554 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || ||||| || || ||||| ||||| || || ||| || Sbjct 51 ATGCAAATCTTCGTCAAGACACTCACCGGAAAGACCATTACCCTCGAGGTGGAGGCCTCC 110 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || ||||| ||||||||||| Sbjct 111 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAGGGAATTCCTCCCGATCAG 170 Query 24824 CAACGTTTGATCTTTGCCGG 24843 || || ||||||| ||||| Sbjct 171 CAGCGCCTGATCTTCGCCGG 190 >seq35470 Length=1843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| |||| || || ||||| || || || || | || || || || | Sbjct 240 GATGCAGATCTTCGTTAAGACACTCACCGGAAAGACCATCACTTTGGAGGTCGAGGCTTC 181 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| || ||||| ||||||||||| Sbjct 180 GGACACGATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGATCA 121 Query 24823 ACAACGTTTGATCTTTGCCGG 24843 || ||| | ||||||||||| Sbjct 120 GCAGCGTCTCATCTTTGCCGG 100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449482648196080