Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_022323.1 Length=136910 Score E Sequences producing significant alignments: (Bits) Value seq33536 84.2 2e-11 >seq33536 Length=1950 Score = 84.2 bits (92), Expect = 2e-11 Identities = 168/249 (67%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 86463 TGAATACCTCACCAACAGTTTCCATCAGCCAGTATGGATAAATAGCTCTCCTTTTGATAA 86522 ||| || |||| ||| ||||| |||||||||||||| | || ||||| | || || Sbjct 1274 TGATTATATCACTAACTCATTCCACCAGCCAGTATGGATTGAAAGTTCTCCGCTAGAGAA 1333 Query 86523 GTGGGAATACGAGGAAGGTTTTGCTATGATCTCCTCTGGTGGCAACATCGGATACGTAGA 86582 ||| | || || ||||||||||| | | ||| || || || | || || || Sbjct 1334 ATGGAATTATGAAGAAGGTTTTGCATTCTTGAGTAATGGCGGGAATATTAGTTATGTTGA 1393 Query 86583 GACACCAAATCTGAAAAACAACTTAGATGCTTTAGAGGCTCTTGTTGACTTCGGGTATAA 86642 |||||||| || ||||| || || || ||||| || | || || | | ||| | Sbjct 1394 AACACCAAACCTTAAAAATAATATAACAGCCTTAGAAGCATTGGTCGATTATGCATATGA 1453 Query 86643 ACACATTATGTATTTTGGTATCAACCAGCCTGTGGATAAATGTCTTAAGTGTGGTTTCTC 86702 || | ||| |||||||| ||||| || || ||||||||| | | || |||| Sbjct 1454 ACGTGTACCGTACTTTGGTATTAACCAACCAGTAGATAAATGTTATGAATGCAATTTCGA 1513 Query 86703 TGGTGAGTT 86711 |||||||| Sbjct 1514 AGGTGAGTT 1522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 437580036407200