Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_022771.1 Length=156648 Score E Sequences producing significant alignments: (Bits) Value seq30457 93.3 4e-14 >seq30457 Length=12079 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 16916 ATGTGGGTTAGTAGTGCATAACTTGCTATGTTAAAAGGGGCACCTAAGAAAATATCATTT 16975 || || |||||||| | ||||| || |||||||| || |||||| ||| | ||| | Sbjct 2200 ATATGAGTTAGTAGAGAGTAACTAGCAATGTTAAATGGAACACCTAGGAATAAATC---T 2144 Query 16976 GATCT-CAT--ATATAACTTACAGCTCAAGGTACCGTTGACTACGTAGAACTGGAATAGG 17032 | || | | ||||| ||||| | | |||| |||||| ||||||| | | Sbjct 2143 GCACTACGTTGATATAGAGTACAGGAAAGTTTGCCGTCCACTACGAAGAACTGAGAGAAA 2084 Query 17033 ACATGACAAGGTGGTAGAGCCATGTACTCTAAGTCTCCTACGTTCCACGCAGATACAATG 17092 |||||| |||||||||||||| | |||| || || |||||||| ||||||| ||| Sbjct 2083 CTATGACAGGGTGGTAGAGCCATCTTATCTAGATCACCCACGTTCCATGCAGATAGAATA 2024 Query 17093 TGTCGGCGGCTGTCTGGGTTAGTTTT 17118 || ||||| | ||||||| |||| Sbjct 2023 TGGCGGCGATCATTTGGGTTATTTTT 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500683380884480