Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_023581.1 Length=77792 Score E Sequences producing significant alignments: (Bits) Value seq30457 152 3e-32 >seq30457 Length=12079 Score = 152 bits (168), Expect = 3e-32 Identities = 257/369 (70%), Gaps = 6/369 (2%) Strand=Plus/Plus Query 37806 ATGTACATCA----ACGTGGCTTTGATCAGATTGATTGGGTTATTAATGAAATTAAAACT 37861 |||||||||| |||| |||| || || | || | ||| ||| | |||| | Sbjct 1944 ATGTACATCATGAAACGTCAAATTGACCAAATAGCGTGTCTAATTGATGGGTTGAAAAAT 2003 Query 37862 AACCCTACATCA-CGCCGTCTAATTGTCAATGGATGGAATCCACATGAAGTAGATAAGGC 37920 ||||| | || | ||||| | ||| | || |||||| ||| |||||||| Sbjct 2004 AACCCAA-ATGATCGCCGCCATATTCTATCTGCATGGAACGTGGGTGATCTAGATAAGAT 2062 Query 37921 AGCATTGCCACCTTGTCATACATTGTTCCAGTTCTTTGTAGAGAATGGAAAACTAAGCTG 37980 || | ||||| ||||||| || | |||||||| |||| | | || ||||| ||| Sbjct 2063 GGCTCTACCACCCTGTCATAGTTTCTCTCAGTTCTTCGTAGTGGACGGCAAACTTTCCTG 2122 Query 37981 TCAGTTATATCAACGTAGTGCTGATTTCTTCTTAGGTGTTCCATTTAATATTGCAAGCTA 38040 | |||||||||||||||| ||||| ||| |||||||||||||||| ||||| || || Sbjct 2123 TACTCTATATCAACGTAGTGCAGATTTATTCCTAGGTGTTCCATTTAACATTGCTAGTTA 2182 Query 38041 TGCGTTGCTTACACATATCGTAGCTGCAGAATGTGGATTAGAAGTTGGTGAATTTGTCTG 38100 | | || || ||||| ||||| || ||||| ||||||||||||| || | || Sbjct 2183 CTCTCTACTAACTCATATGTTAGCTCAAGTTTGTGGTCTAGAAGTTGGTGAGTTCATTTG 2242 Query 38101 GACTGGTGGTGTAGTTCACCTGTACAGTAATCACCTTGAGCAAGCTAAAAAACAATTAAG 38160 || |||||||| |||| | ||| || ||| | || |||| |||| | ||| || Sbjct 2243 GATTGGTGGTGATTGTCACATCTACCAAAACCACGTAGAACAAGTTAAAGAGCAACTAGC 2302 Query 38161 TCGTCCACC 38169 |||| |||| Sbjct 2303 TCGTACACC 2311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248585853768538