Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oscheius_20sp._20TEL-2014_20[genbank_20GCA_5F001513535.1_202016-01- 12] 73,786 sequences; 117,474,248 total letters Query= NC_024122.1 Length=162910 Score E Sequences producing significant alignments: (Bits) Value seq48399 87.8 2e-12 seq22710 86.0 7e-12 >seq48399 Length=862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 81876 CTTATTGGTGTGAGTGGATGGATTTGAACCACCGCGTGGGATACCTGATTTACAGTCAGG 81935 |||| |||| | | || |||||| |||||| ||||||| || | ||||||||||||| | Sbjct 569 CTTAATGGTTGGGGAGGTTGGATTCGAACCAACGCGTGGTATGCTTGATTTACAGTCAAG 510 Query 81936 CGCATTCGACCGCTCTGCCAC 81956 |||||||||||||||||||| Sbjct 509 TGCATTCGACCGCTCTGCCAC 489 >seq22710 Length=1561 Score = 86.0 bits (94), Expect = 7e-12 Identities = 87/111 (78%), Gaps = 3/111 (3%) Strand=Plus/Minus Query 11720 CTCGAAGGCGTTCGTTTCTATGTTTCATTCGCGTGTTCTTGGGCTTTCATGCAATTCCTC 11779 || ||||| |||| |||||||||||||| || ||||||||||||||| ||| | Sbjct 761 CTTGAAGGTATTCGCTTCTATGTTTCATTTGCATGTTCTTGGGCTTTC--GCAGAGAATA 704 Query 11780 AACAAAATGGAAGGCAACGCTAAAATCATCCGTCAGATTGCTCGTGATGAG 11830 ||| ||||||||| |||||||| |||||||||| ||| ||||| ||| Sbjct 703 AAC-TAATGGAAGGGAACGCTAAGATCATCCGTCTAATTTGCCGTGACGAG 654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520703298967200